The mechanism of Pseudomonas aeruginosa outer membrane vesicle biogenesis determines their protein composition.

Lauren Zavan; Haoyun Fang; Ella L Johnston; Cynthia Whitchurch; David W Greening; Andrew F Hill; Maria Kaparakis-Liaskos
Abstract
Gram-negative bacteria produce outer membrane vesicles (OMVs) and contain bacterial cargo including nucleic acids and proteins. The proteome of OMVs can be altered by various factors including bacterial growth stage, growth conditions, and environmental factors. However, it is currently unknown if the mechanism of OMV biogenesis can determine their proteome. In this study, we examined whether the mechanisms of OMV biogenesis influenced the production and protein composition of Pseudomonas aeruginosa OMVs. OMVs were isolated from three P. aeruginosa strains that produced OMVs either by budding alone, by explosive cell lysis, or by both budding and explosive cell lysis. We identified that the mechanism of OMV biogenesis dictated OMV quantity. Furthermore, a global proteomic analysis comparing the proteome of OMVs to their parent bacteria showed significant differences in the identification of proteins in bacteria and OMVs. Finally, we determined that the mechanism of OMV biogenesis influenced the protein composition of OMVs, as OMVs released by distinct mechanisms of biogenesis differed significantly from one another in their proteome and functional enrichment analysis. Overall, our findings reveal that the mechanism of OMV biogenesis is a main factor that determines the OMV proteome which may affect their subsequent biological functions.
Journal PROTEOMICS
ISSN 1615-9861
Published 01 May 2023
Volume 23
Issue 10
Pages e2200464 e2200464
DOI 10.1002/pmic.202200464
Type Journal Article
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